Book

• Wolfgang Banzhaf and Lidia Yamamoto, "Artificial Chemistries", MIT Press, July 2015, 576 pages.

Book Chapters, Journals, Magazines

• Lidia Yamamoto, Pierre Collet, and Wolfgang Banzhaf, "Artificial Chemistries on GPU" In: Shigeyoshi Tsutsui and Collet, Pierre (Eds.), "Massively Parallel Evolutionary Computation on GPGPUs", Natural Computing Series, Springer, pages 389-419, 2013. [preprint pdf]
• Lidia Yamamoto, Daniele Miorandi, Pierre Collet, W. Banzhaf, "Recovery Properties of Distributed Cluster Head Election Using Reaction-Diffusion", Swarm Intelligence, Springer, pages 225--255, Volume 5, No 3-4, December 2011, doi:10.1007/s11721-011-0058-8. [preprint pdf]
• Daniele Miorandi, Lidia Yamamoto, Francesco De Pellegrini, "A survey of evolutionary and embryogenic approaches to autonomic networking", Computer Networks, Volume 54, Issue 6, 29 April 2010, Pages 944-959.
• Thomas Meyer, Daniel Schreckling, Christian Tschudin, Lidia Yamamoto: "Robustness to Code and Data Deletion in Autocatalytic Quines", Transactions on Computational Systems Biology X, LNBI 5410, Priami, C.; Dressler, F.; Akan, O.B.; Ngom, A. (Eds.), 2008, pp. 20-40. [preprint pdf]
• Juan José Ramos Muñoz, Lidia Yamamoto and Christian Tschudin: "Serial Experiments Online", ACM SIGCOMM Computer Communication Review 38(2):31-42, April 2008. [preprint pdf]
• Daniele Miorandi, Lidia Yamamoto and Paolo Dini: "Service Evolution in Bio-Inspired Communication Systems", International Conference on Self-Organization and Autonomous Systems in Computing and Communications (SOAS 2006), September 2006. In: International Transactions on Systems Science and Applications Journal (ITSSA), vol. 2, n. 1, pp. 51-60. [preprint pdf]
• Christian Tschudin and Lidia Yamamoto: "Self-Evolving Network Software", Praxis der Informationsverarbeitung und Kommunikation (PIK Magazine) 28 (2005) 4, K. G. Saur Verlag, Munich, Germany, December 2005, pp. 206-210. [preprint pdf]
• L. Yamamoto and G. Leduc, "Autonomous Reflectors over Active Networks: Towards Seamless Group Communication", The Interdisciplinary Journal of Artificial Intelligence & the Simulation of Behaviour (AISBJ), Special issue on Agent Technology, vol. 1, nb. 1, Dec. 2001, pp. 125-146. [preprint pdf]
• Lidia Yamamoto, Guy Leduc, "Resource Trading Agents for Adaptive Active Network Applications". Network and Information Systems Journal (NIS), vol. 3, 2000. Also appeared as a book chapter in "Mobile Agents for Telecommunication Applications", by Eric Horlait (Ed.), Hermes Penton Science, UK, July 2002. [preprint ps.gz]

International Conferences and Workshops with Peer-Reviewing and Proceedings

• Lidia Yamamoto, Pierre Collet, and Wolfgang Banzhaf "Evolving Reaction-Diffusion Systems on GPU", Progress in Artificial Intelligence, Proc. 15th EPIA-2011, Lisbon, Portugal, 2011. In: L. Antunes and H. Sofia Pinto (Eds.), Springer, LNCS 7026, pp. 208-223, 2011. [preprint pdf]
• Lidia Yamamoto and Daniele Miorandi, "Evaluating the Robustness of Activator-Inhibitor Models for Cluster Head Computation", In: M. Dorigo et al. (Eds.), Swarm Intelligence, Lecture Notes in Computer Science Volume 6234, Springer, pages 143-154, 2010. [preprint pdf]
• Lidia Yamamoto and Wolfgang Banzhaf, "Catalytic Search in Dynamic Environments". In: H. Fellermann et al. (Eds.), Artificial Life XII, Proc. 12th. International Conference on the Synthesis and Simulation of Living Systems, Odense, Denmark, August 2010, MIT Press, pp. 277-284 (electronic publication) [preprint pdf]
• Lidia Yamamoto, Thomas Meyer, "Biochemically-Inspired Emergent Computation". Artificial Immune Systems, 9th International Conference, ICARIS 2010, Edinburgh, UK, July 26-29, 2010. In: E. Hart et al. (Eds.), Springer LNCS vol. 6209, 2010, pp. 320-321. [preprint pdf]
• Lidia Yamamoto, "Evaluation of a Catalytic Search Algorithm", In: J. R. Gonzalez et al. (Eds.), Nature Inspired Cooperative Strategies for Optimization (NICSO 2010), Proc. International Workshop, May 2010, Granada, Spain. Volume 284 of Studies in Computational Intelligence, Springer, 2010, pp. 75-87. [preprint pdf]
• David Lowe, Amir Mujkanovic, Daniele Miorandi, Lidia Yamamoto, "Fault Tolerance of Embryonic Algorithms in Mobile Networks", In: Gianluca Tempesti, Andy M. Tyrrell, and Julian F. Miller, Evolvable Systems: From Biology to Hardware, Proc. 9th International Conference. Volume 6274 of Lecture Notes in Computer Science, Springer, pp. 49-60, 2010. [preprint pdf]
• Daniele Miorandi, David Lowe, Lidia Yamamoto, "Embryonic Models for Self-Healing Distributed Services", In: E. Altman et al. (Eds.), Bioinspired Models of Network, Information, and Computing Systems, Volume 39 of Lecture Notes of the Institute for Computer Sciences, Social Informatics and Telecommunications Engineering, Springer, pp. 152-166, 2010.
• Thomas Meyer, Lidia Yamamoto, Wolfgang Banzhaf, Christian Tschudin, "Elongation Control in an Algorithmic Chemistry", Proc. 10th European Conference on Artificial Life (ECAL 2009), Budapest, Hungary, September 2009. In: G. Kampis, I. Karsai, E. Szathmary (Eds.), Advances in Artificial Life. Darwin Meets von Neumann, Springer LNCS vol. 5777, 2011, pp. 273-280. [preprint pdf]
• Thomas Meyer, Lidia Yamamoto, Christian Tschudin, "A Self-Healing Multipath Routing Protocol", Proc. 3rd International Conference on Bio-Inspired Models of Network, Information, and Computing Systems (BIONETICS 2008), ICST, November 2008. [preprint pdf]
• Daniele Miorandi and Lidia Yamamoto: "Evolutionary and Embryogenic Approaches to Autonomic Systems", Proc. 3rd ICST International Conference on Performance Evaluation Methodologies and Tools (ValueTools 2008), Athens, Greece, October 2008. [preprint pdf]
• Thomas Meyer, Lidia Yamamoto, Christian Tschudin, "An Artificial Chemistry for Networking", Bio-Inspired Computing and Communication, First Workshop on Bio-Inspired Design of Networks (BIOWIRE 2007), Cambridge, UK, April 2-5, 2007. In: Lio, P.; Yoneki, E.; Crowcroft, J.; Verma, D.C. (Eds.), Springer LNCS vol. 5151, Revised Papers, 2008, pp. 45-57. [preprint pdf]
• Daniele Miorandi, Iacopo Carreras, Eitan Altman, Lidia Yamamoto, Imrich Chlamtac, "Bio-Inspired Approaches for Autonomic Pervasive Computing Systems", Bio-Inspired Computing and Communication, First Workshop on Bio-Inspired Design of Networks (BIOWIRE 2007), Cambridge, UK, April 2-5, 2007. In: Lio, P.; Yoneki, E.; Crowcroft, J.; Verma, D.C. (Eds.), Springer LNCS vol. 5151, Revised Papers,2008, pp. 217-228.
• Lidia Yamamoto, "PlasmidPL: A Plasmid-Inspired Language for Genetic Programming", Proc. 11th European Conference on Genetic Programming (EuroGP 2008), Naples, Italy, March 2008. In: Michael O'Neill et al. (Eds.), Genetic Programming, Springer LNCS vol. 4971, Springer, pp. 337-349, 2008. [preprint pdf]
• Lidia Yamamoto, Daniel Schreckling, Thomas Meyer, "Self-Replicating and Self-Modifying Programs in Fraglets", Proc. 2nd International Conference on Bio-Inspired Models of Network, Information, and Computing Systems (BIONETICS 2007), Budapest, Hungary, December 2007. [preprint pdf]
• Lidia Yamamoto, "Code Regulation in Open Ended Evolution", Proc. 10th European Conference on Genetic Programming (EuroGP 2007), Valencia, Spain, April 2007. In: M. Ebner et al. (Eds.), Genetic Programming, Springer LNCS volume 4445, pp. 271-280, 2007. [preprint pdf]
• Christian Tschudin and Lidia Yamamoto, "Harnessing Self-modifying Code for Resilient Software", Proc 2nd IEEE Workshop on Radical Agent Concepts (WRAC), NASA Goddard Space Flight Center Visitor's Center, Greenbelt, MD, USA, September 2005. In: Michael G. Hinchey et al. (Eds.), Innovative Concepts for Autonomic and Agent-Based Systems, Springer LNCS 3825, pp. 197-204, 2006. [preprint pdf]
• Lidia Yamamoto and Christian Tschudin, "Experiments on the Automatic Evolution of Protocols using Genetic Programming", Autonomic Communication, Proc. 2nd IFIP Workshop (WAC 2005), Athens, Greece, October 2005. In: I. Stavrakakis and M. Smirnov (Eds.), Springer LNCS volume 3854, pp. 13-28, 2006. [preprint pdf]
• Tatsuaki Osafune and Lidia Yamamoto, "Analysis of an Epidemic Dissemination Protocol for Ad Hoc Networks", Symposium on Ad-hoc Sensor Networks, International Conference on Wireless Networks, Communications, and Mobile Computing (WirelessCom 2005), Maui, Hawaii, USA, June 2005. [preprint pdf]
• Lidia Yamamoto and Christian Tschudin, "Genetic Evolution of Protocol Implementations and Configurations", Proc. IFIP/IEEE International Workshop on Self-Managed Systems & Services (SelfMan'05), May 2005, Nice, France. [preprint pdf]
• Christian Tschudin and Lidia Yamamoto, "A Metabolic Approach to Protocol Resilience", In: M. Smirnov (Ed.), Autonomic Communication, Proc. 1st. Workshop on Autonomic Communication (WAC 2004), Berlin, Germany, October 2004. Springer LNCS volume 3457, pp. 191-206, 2005. [preprint pdf]
• Spyros Denazis and Lidia Yamamoto, "A Unified Framework for the negotiation and Deployment of Network Services", Proc. 1st. Workshop on Autonomic Communication (WAC 2004), Berlin, Germany, October 2004. In: M. Smirnov (Ed.), Autonomic Communication, Springer LNCS volume 3457, pp. 79-93, 2005. [preprint pdf]
• Lidia Yamamoto, "Automated Negotiation for On-demand Inter-domain Performance Monitoring", Proc. 2nd. International Workshop on Inter-Domain Performance and Simulation (IPS 2004), Budapest, Hungary, March 2004. [preprint pdf]
• Lidia Yamamoto, Guy Leduc, "Autonomous Multicast Reflectors over Active Networks". Proc. Symposium on Software mobility and adaptive behaviour, AISB'01 Convention, York, UK, March 2001. [preprint pdf]
• Lidia Yamamoto, Guy Leduc, "An Active Layered Multicast Adaptation Protocol". Active Networks, Proc. 2nd International Working Conference (IWAN 2000), Tokyo, Japan, October 2000. In: H. Yasuda (Ed.), Springer LNCS volume 1942, 2001, pp. 180-194. [preprint pdf]
• Lidia Yamamoto, Guy Leduc, "Adaptive Applications over Active Networks: Case Study on Layered Multicast". Proc. 1st IEEE European Conference on Universal Multiservice Networks (ECUMN 2000), Colmar, France, October 2000, pp. 386-394. [preprint pdf]
• Lidia Yamamoto, Guy Leduc, "An Agent-Inspired Active Network Resource Trading Model Applied to Congestion Control". In: E. Horlait (Ed.), Mobile Agents for Telecommunication Applications, Proc. 2nd International Workshop (MATA 2000), Paris, France, September 2000. Volume 1931 of Lecture Notes in Computer Science, Springer, pp. 151-169, 2000. [preprint pdf]
• Omar Ait-Hellal, Lidia Yamamoto, Guy Leduc, "Cycle-Based TCP-Friendly Algorithm". Proceedings of the IEEE Global Telecommnications Conference (GLOBECOM'99), Rio de Janeiro, Brazil, December 1999, pp. 776-780. [preprint pdf]

Doctoral dissertation

• Lidia A. Rodrigues Yamamoto, "Adaptive Group Communication over Active Networks", Doctoral thesis, Collection of Publications from the Applied Sciences Faculty of the University of Liège (Belgium), n. 224, February 2003, 166 pages.

Invited Talks and Tutorials (selected subset)

• Lidia Yamamoto, "Artificial Chemistries", Lidia Yamamoto, Artificial Chemistries: Overview and Computing Aspects, online talk at the e-track "Engineering and Control of Self-Organization", Conference on Complex Systems, October 2015. [video]
• Lidia Yamamoto and Wolfgang Banzhaf, Emergence in Artificial Chemistries, talk at the 4th Conference on Emergence in Chemical Systems, Anchorage, Alaska, June 2015.
• Lidia Yamamoto, "Fraglets and the Evolution of Chemical Programs", talk at the 28th CREST Open Workshop on Genetic Programming for Software Engineering, UCL, London, UK, October 2013.
• Lidia Yamamoto, Thomas Meyer, Christian Tschudin, series of invited talks at the Organic Computing Mini-Workshop on In-Silico Chemical Computing, August 31 - September 02, 2010, Friedrich Schiller University Jena, Germany.
• Lidia Yamamoto, "Artificial Chemistries for Distributed Computation and Optimization", Seminar, University of York, UK, August 2010.
• Lidia Yamamoto, "Self-Organization in Chemical Computing", invited talk, Telecommunications Club Panel, Budapest, Hungary, May 2009.
• Christian Tschudin, Lidia Yamamoto, "Réseaux BioInspirés" (Bio-Inspired Networks), RESCOM Summer School "Réseaux Autonomes et Internet du Futur" (Autonomous Networks and Future Internet), Calcatoggio, Corsica, France, June 2007.
• Lidia Yamamoto, Guy Leduc, "An Active Network Resource Trading Model Applied to Congestion Control". Invited presentation, 2èmes Journées Multimédia, Facultés Universitaires Notre-Dame de la Paix, Namur, Belgium, Septembre 2000.
• Lidia Yamamoto, Guy Leduc, "Adaptive Applications over Active Networks: Case Study on Layered Multicast". MBone presentation, COST 264 Euroseminar, July 2000.

Short Papers, Abstracts

• Susan Stepney, Ada Diaconescu, Rene Doursat, Jean-Louis Giavitto, Taras Kowaliw, Ottoline Leyser, Bruce MacLennan, Olivier Michel, Julian F. Miller, Igor Nikolic, Antoine Spicher, Christof Teuscher, Gunnar Tufte, Francisco J. Vico, Lidia Yamamoto, "Gardening Cyber-Physical Systems", abstract, Unconventional Computation and Natural Computation, Proc. 11th International Conference, Orlean, France, September 2012. Volume 7445 of the series Lecture Notes in Computer Science pp 237-238. [preprint techreport, pdf]
• Lidia Yamamoto, "Epidemic Dissemination in Ad Hoc Networks", Extended Abstract, Dagstuhl Seminar 04411, Service Management and Self-Organization in IP-based Networks, Schloss Dagstuhl, Germany, October 2004.
• Lidia Yamamoto, Guy Leduc "Building Bidirectional Multicast Trees Using Autonomous Reflectors" Short paper, 3rd. International Working Conference on Active Networks (IWAN 2001), Philadelphia, Pennsylvania, USA, September-October 2001.

Patent Applications

• Lidia Yamamoto and Masato Hayashi, "Method and apparatus for allocating a unique identifier to a network node", European Patent Office Application Number EP 04292627.9, filed in November 2004.
• Lidia Yamamoto and Masato Hayashi, "Method and apparatus for disseminating, storing and collecting information in a communication network". EPO Application Number EP 04291137.0, filed in May 2004.

Last modified: 2015-09-30 by Lidia Yamamoto